bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_2086_orf2 Length=155 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0153 213 9e-55 > 5833.PF10_0153 Length=580 Score = 213 bits (543), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 101/135 (74%), Positives = 114/135 (84%), Gaps = 0/135 (0%) Query 21 QVRNASKDIRFGSDARMQMLAGCNRLADAVGVTLGPKGRNVVIAQPFGSPKITKDGVTVA 80 Q RN SKDIRFGSDAR ML GCN+LADAV VTLGPKGRNV+I Q FGSPKITKDGVTVA Sbjct 27 QKRNISKDIRFGSDARTAMLTGCNKLADAVSVTLGPKGRNVIIEQSFGSPKITKDGVTVA 86 Query 81 KAIELANKTENLGAQLLKQVAATTNDIAGDGTTTAAILGRAIFKEGCKAIDAGMNPMDVL 140 K+IE NK NLGAQ++KQVAA TND AGDGTTTA IL R+IF++GCKA+D+GMNPMD+L Sbjct 87 KSIEFNNKLANLGAQMVKQVAANTNDKAGDGTTTATILARSIFQQGCKAVDSGMNPMDLL 146 Query 141 RGIHLAVEHVLSALS 155 RGI+ VE VL L+ Sbjct 147 RGINKGVEKVLEYLN 161 Lambda K H 0.318 0.131 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23746592502 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40