bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1981_orf2
Length=181
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  9615.ENSCAFP00000027403                                             68.6    8e-11


> 9615.ENSCAFP00000027403
Length=1168

 Score = 68.6 bits (166),  Expect = 8e-11, Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 22/132 (16%)

Query  1    SPCGPASVCVNTVGSYQCKCRKGFQ-----QTQEACIDIDECSLGLQNLIPRPCPLQAEC  55
            SPCGP SVC+NT+GSY C+C KGF+      +   C +++EC+          CP  A+C
Sbjct  372  SPCGPNSVCINTLGSYSCRCNKGFRPNPGGSSNFTCQNVNECA------DTTTCPAYAKC  425

Query  56   HNFSGTFDCICPRG-TAWNGI---SGPAAQCLRINSPNRGPCANNGGCGVNSLCQALFTS  111
             +   ++ C C RG    NG+    GP   C+ I+  ++ P      CG NS+C+ +   
Sbjct  426  TDTPDSYYCTCKRGFLPSNGVKQFKGPGVTCIDIDECSQSP----PPCGPNSVCENIL--  479

Query  112  EATRKCNCVNGF  123
                KC+C+ GF
Sbjct  480  -GRYKCSCLPGF  490



Lambda     K      H
   0.322    0.135    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 37665090561


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40