bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1839_orf2 Length=83 Score E Sequences producing significant alignments: (Bits) Value 13616.ENSMODP00000020220 68.6 5e-11 > 13616.ENSMODP00000020220 Length=1204 Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%) Query 1 TLAAVLTYDSSVHFYRLEASQTRPRLFVVPQVQDIFLPLAENLFVPLHECKEAILNTLNA 60 T +T+DS+VHFY L+ ++P++ +V + DIFLP ++L V LHE KE I + LNA Sbjct 654 TRIGFITFDSTVHFYNLQEGLSQPQMLIVSDIDDIFLPTPDSLLVNLHESKELIKDLLNA 713 Query 61 IPDIF-FSKAKRTRLPP 76 +P++F +++ + L P Sbjct 714 LPNMFTYTRETHSALGP 730 Lambda K H 0.325 0.138 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22659344793 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40