bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1745_orf1 Length=111 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_2310 87.8 1e-16 > 5807.cgd2_2310 Length=544 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query 1 EASADGRVSRISGATWFYAPAELLRCSPVECMASRTTVQLPPLNEKWDIWSMGCVLQEMF 60 E G R+SGATW Y+P ELL P+ S +V NEKWDIWS+GCV+QE F Sbjct 414 EEFGSGNKRRLSGATWLYSPIELLNADPIGNHISIQSVS--QYNEKWDIWSLGCVIQEFF 471 Query 61 GFLSPMHVHISNRDSPNVIYEKLKSKAISGTLVPDIASGIQGIARNIIARC 111 G +P + D+ N IY KL +P+I + I R +I C Sbjct 472 GNSNPFEYIVDFADNSNQIYSKLVKAVRENKYIPNIPTNIHPRIRKVIEMC 522 Lambda K H 0.321 0.134 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23016794144 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40