bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1680_orf1 Length=94 Score E Sequences producing significant alignments: (Bits) Value 323850.Shew_2314 69.7 2e-11 > 323850.Shew_2314 Length=173 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Query 4 FAVFDLPPSFDVNLPVLFARYKQLQQQLHPDKLVNKSQEEKEICSIHQQQIAAALRRLKD 63 F +F L PSF+++ VL RY++LQ+ +HPDK N S+++K + H Q+ LK Sbjct 4 FELFSLSPSFELDTAVLSERYRELQRAVHPDKFANASEQDKRLAVQHTAQVNDGYNTLKH 63 Query 64 PADRAEHLLFIQGRIQQHNSFLI--LIFLL 91 P RAEH+L ++G H S + +FL+ Sbjct 64 PISRAEHMLSLKGIDLSHESTTVKDTMFLM 93 Lambda K H 0.327 0.140 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22695718710 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40