bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1613_orf1 Length=145 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_2620 236 1e-61 > 5807.cgd3_2620 Length=1902 Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/143 (79%), Positives = 125/143 (87%), Gaps = 1/143 (0%) Query 1 ARVNKELNAAREKSAKVASEQLDES-NNIMAMVLAGSKGSIINISQIMACVGQQNVEGKR 59 A+VN+ELN+ARE S +A+E LD S NNI+AMV GSKGS INISQIMACVGQQNVEGKR Sbjct 750 AQVNQELNSARELSGTIATENLDSSKNNIVAMVQCGSKGSTINISQIMACVGQQNVEGKR 809 Query 60 IPSGFNNRSLPHFSKFDYPPESRGFVEHSYLTGLLPQELFFHAMGGREGIIDTACKTSET 119 IP GF +RSLPHF K+DY PESRGFV +SYL+GL PQE+FFHAMGGREGIIDTACKTSET Sbjct 810 IPFGFRDRSLPHFLKYDYGPESRGFVSNSYLSGLTPQEVFFHAMGGREGIIDTACKTSET 869 Query 120 GYIQRRLMKAMEDVKVSYDRTVR 142 GYIQRRL+KAMED V YDRTVR Sbjct 870 GYIQRRLIKAMEDCMVQYDRTVR 892 Lambda K H 0.318 0.132 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22480264135 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40