bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1608_orf2 Length=119 Score E Sequences producing significant alignments: (Bits) Value 9258.ENSOANP00000025432 140 1e-32 > 9258.ENSOANP00000025432 Length=171 Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 67/118 (56%), Positives = 92/118 (77%), Gaps = 0/118 (0%) Query 2 SSSSSSGVTNGLNRRELSEQHKEEIKEVFKLFDTDGSGCIDTKELQVAMRALGFEPKKDE 61 SSSS+ + EL+E+ K+EI+E F LFD DGSG ID KEL+VAMRALGFEPKK+E Sbjct 8 SSSSTVQRKKVSVKTELTEEQKQEIREAFDLFDADGSGSIDVKELKVAMRALGFEPKKEE 67 Query 62 IRRIVASVDPEGSGRIEYPEFFSIMGEKILARDPKEEMQKAFRLFDDDGSGKINFKKL 119 I++++A +D EGSG I++ +F ++M +K+ +D KEE+ KAFRLFDDDG+GKI+FK + Sbjct 68 IKKMIADIDKEGSGTIDFEDFLAMMTQKMNEKDSKEEILKAFRLFDDDGTGKISFKNI 125 Lambda K H 0.313 0.134 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22381075488 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40