bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1549_orf1
Length=137
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  10116.ENSRNOP00000056202                                            69.7    2e-11


> 10116.ENSRNOP00000056202
Length=860

 Score = 69.7 bits (169),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query  3    SAVDLWRKLAKGELQDPHYSG-XDRVVNLLKNCQNSRLILNNIEFLLEHNQEMAVEILIL  61
            SAV LW  +  G++QD   S   + +V+ L  C +  L+  + ++LL+ +QE+ V++   
Sbjct  504  SAVQLWVNIVNGDIQDSTRSDLYEYIVDFLTYCLDQELVWTHADWLLQKSQEVGVQVFT-  562

Query  62   NTRMEDNKFPVLEPEHVITVLHKYRRALIIYLEFVVFDLKVKSTPIHNRLAMLYVEIISL  121
               +++ +     P+ +I+ L KY +AL+ YLE +V D +++    H  LA+LY+E +  
Sbjct  563  KRPLDEQQQTSFNPDDIISCLKKYPKALVKYLEHLVIDRRLQKEEYHTHLALLYLEEVLR  622

Query  122  QR  123
            QR
Sbjct  623  QR  624



Lambda     K      H
   0.322    0.138    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22428990562


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40