bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1536_orf1 Length=164 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL7P1.166 254 8e-67 > 5833.MAL7P1.166 Length=1578 Score = 254 bits (648), Expect = 8e-67, Method: Composition-based stats. Identities = 117/165 (70%), Positives = 140/165 (84%), Gaps = 1/165 (0%) Query 1 VKGPPGTGKTHVACAIIDAWQRINPTKKILAVADSNVAADNLMEGLSNRGIRSVRVGSGS 60 V+GPPGTGKTHVACAIID+W + N KKILAVADSNVAA+NL+EGL R I++VRVG+GS Sbjct 1091 VQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAANNLVEGLKKRNIQAVRVGAGS 1150 Query 61 ESDLKEESIQDLARYRDLLRIRDKN-SGEARSLRMLLVREAVRKYNVIIATCVGSGHEMF 119 +SD EE+I + RY+DLL++R N EA+ ++ LL EAV+KYNV+IATCVGSGHE+F Sbjct 1151 DSDFHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIF 1210 Query 120 DDVTFERVIIDECAQSIEPSNLIPLGHGCRSVVLIGDHKQLPPTI 164 D+ FERVIIDECAQSIEPSNLIPLGH C ++VLIGDHKQLPPTI Sbjct 1211 DNEKFERVIIDECAQSIEPSNLIPLGHYCNNLVLIGDHKQLPPTI 1255 Lambda K H 0.319 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28631644438 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40