bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1263_orf1
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
349161.Dred_3137 82.4 3e-15
> 349161.Dred_3137
Length=506
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query 1 DLEKVVRETSVESVLIAAPGLSQSALSDLIYRVQLLVKDVGVILNLVGVPMSNIEAESFF 60
D E+++ +T V+ V++AAPGL L L R+Q LV +V V+ +L G+ M+ IE E FF
Sbjct 227 DAEELIAKTKVQDVIVAAPGLPPKELVTLTNRLQPLVNNVMVVPDLFGLSMNGIEVEYFF 286
Query 61 DAKIMVLHIKNDLARKSNQIVKRLFD-VAATIIGGICILPVLFIVA 105
D + ++L+IKN L N+ +KR FD V TII +CI P+L I+A
Sbjct 287 DEQTLLLNIKNKLRSALNRGIKRAFDIVTGTIISVLCI-PILVILA 331
Lambda K H
0.326 0.141 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23096258976
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40