bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1232_orf2 Length=484 Score E Sequences producing significant alignments: (Bits) Value 9258.ENSOANP00000024786 236 1e-60 > 9258.ENSOANP00000024786 Length=1021 Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 151/470 (32%), Positives = 238/470 (50%), Gaps = 17/470 (3%) Query 11 SAIGALGNDILKPEADYRDFRHYQLSNGMHAIAVHHPRSNEAGFAVAANTGSLYDPEDVP 70 SA+ + N+I+K D R++R +L+NG+ AI + P ++++ A+ + GSL DP ++ Sbjct 47 SAVKRIVNNIIKSPEDKREYRGLELANGIKAILISDPTTDKSSAALDVHIGSLSDPPNIA 106 Query 71 GLAHFLEHMLFLGTSKYPEPESYDGFLTQNGGANNAYTDEEKTVFFNKVTDSAFEEALDR 130 GL+HF EHMLFLGT KYP+ Y FL+++ G++NA+T E T ++ V+ E ALDR Sbjct 107 GLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDR 166 Query 131 FAEFFKSPLFSRQYEEKEVNAIDAEHQKNIPNDDERAWYTIRSLAKG--PMSRFATGNSE 188 FA+FF PLF +++EVNA+D+EH+KN+ ND R + ++ P S+F TGN Sbjct 167 FAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKY 226 Query 189 TLSTNPKAKGIDLVDRLRDFHSKYYCGSNMVAVTISPR-SLDEQESLIREKLEGISAGHA 247 TL T P +GID+ L FHS YY SN++A+ + R SLDE SL+ + + + Sbjct 227 TLETRPTKEGIDVRQELLKFHSTYY-SSNLMAICVLGRESLDELTSLVVKLFSEVENKNV 285 Query 248 DWLGMVQCPGPMFDTVKPFDHTNSGKFIHMQSFSSEPSLWVAFGLPATLTSYKKQPTSVL 307 P P F PF + + + +L+V F +P YK P L Sbjct 286 --------PLPEFPE-HPFQEHHLRQIYKVVPIKDIRNLYVTFPIPDLQKYYKSNPGHYL 336 Query 308 TYLLEYTGEGSLAKRLRLLGLADGISPAVDRNSISTLLG-IKVDLTQKGAAHRGLVLQEI 366 +L+ + G GSL L+ G + + + + I VDLT++G H ++ + Sbjct 337 GHLIGHEGPGSLLSELKAKGWVNTLVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHM 396 Query 367 FSYINFLRDHGVGHELVSTMAQQSHIDFHTTQPSSSIMDEAARLAHNLLTYEPYHVVAGD 426 F YI LR G + + + F ++L L Y V+A + Sbjct 397 FQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERP-RGYTSKLGGMLHYYPLEEVLAAE 455 Query 427 SLLIDADPRLTNQLLQEMSPSKAIIAFSDPDFTSKVDSFETDPYYGVQFR 476 LL + P L +L ++ P +A F K D +T+ +YG Q++ Sbjct 456 YLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTD--QTEEWYGTQYK 503 Lambda K H 0.317 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 206856738528 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40