bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1180_orf1
Length=137
Score E
Sequences producing significant alignments: (Bits) Value
6239.F53A2.4 64.3 9e-10
> 6239.F53A2.4
Length=320
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query 40 KHQVQNATAS-SKSTGEEGSTS------DEERESSRPE-GNGGQTDKYRWTQTLESVDVY 91
K Q +N+ + K EG TS DE+ + +P GNG KY+WTQTL+ ++V
Sbjct 114 KEQAKNSVENLEKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADLAKYQWTQTLQELEVK 173
Query 92 VPMGEG--VRASQCQVKITATTLTLGFKGQAPILSGEFSQRVQAED 135
+P+ G +++ VKI T++++G K QAPI+ G+ ++ E+
Sbjct 174 IPIAAGFAIKSRDVVVKIEKTSVSVGLKNQAPIVDGKLPHAIKVEN 219
Lambda K H
0.316 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22428990562
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40