bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1166_orf1 Length=484 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0172 449 8e-125 > 5833.PF11_0172 Length=455 Score = 449 bits (1156), Expect = 8e-125, Method: Compositional matrix adjust. Identities = 220/443 (49%), Positives = 307/443 (69%), Gaps = 5/443 (1%) Query 32 VQAAAGTGETSDGLLPHLADSHFWKKLSFTQFVIYLVGFSEGLTHLAALAIYYMLKDDLG 91 V+ GE LP L++ K FTQ V+YLVG S+GLTHLA+LAIYY+ KD Sbjct 16 VERTKSNGEG----LPLLSEKT-KKGFDFTQIVVYLVGLSDGLTHLASLAIYYLFKDYFR 70 Query 92 LSPAEVSALFIAPALPWVFKPIFAFISDSYPLYGSRRKPYMIAFSLLEGLGFIMLGTFPT 151 L+P +VS + + P +P++ KP+ A I+DS+ ++G RRKPY+ FSL + L F+ L Sbjct 71 LTPYQVSLILMYPYIPFILKPVIALITDSFSIFGMRRKPYLFLFSLFQSLNFLALAFLNL 130 Query 152 HILTALLSLFIISISAAFCSAVAEALVVETTAGRSMDQSAENVSDFITAKAVGSLIVAYL 211 ++ A L LF IS+ A+FC+ VAEALVVE++ G++ Q V++FI +KA+GSL VAY Sbjct 131 SVIQASLILFFISLCASFCTTVAEALVVESSMGQTYSQGTNKVTEFIASKAIGSLSVAYF 190 Query 212 SGYLLERTSKQSIFLATSIFPLFIALITTFMTDEGGAPSYDMKTQLRLLMEFLKQSVIWG 271 SGY LE+ ++ IF+ATSIFPL I+L F+ ++ + + ++ QL L++F+ + G Sbjct 191 SGYFLEKMPREYIFIATSIFPLIISLSCLFLKEKEYSTNRNIFNQLSDLIKFINTPIFLG 250 Query 272 PALYIFAYMAGPDYDDALFFYFTNKLGFSPTFMGTLRFTYGIAALVGVVMYRTFFKRTGF 331 P LYIF YM+GPDYDDA FF+ TNKLGF P+FMGTLR TYGIA+L+G+++YR F K Sbjct 251 PFLYIFVYMSGPDYDDAFFFFCTNKLGFRPSFMGTLRLTYGIASLIGIIIYRVFLKNCSL 310 Query 332 RKTLLATILVAVPIYLSPIILTTGFNRTLGISNKAFVLSGGFLIEATAEIQLLPLLVLTA 391 RKTL+ T LV+ PIY+SPIILT N+ LGISN+ FVLSGGFLIEA EIQLLPL +LTA Sbjct 311 RKTLIITTLVSFPIYISPIILTEHINKFLGISNELFVLSGGFLIEAITEIQLLPLFILTA 370 Query 392 SICPPGLEGSVYAMMMSVRNTGAMASRGISAILTYMAGITSSNFTHLTGYIMLCGASLLI 451 +IC PGLE SV+A ++SV+N G++ +G S+ +TY+ I S NF +L+ YI+ CG LL Sbjct 371 NICQPGLEASVFATILSVKNLGSLTKKGTSSFITYLMKIDSYNFDNLSLYILTCGFFLLF 430 Query 452 PLIFLEYVPDDAEVQRVKQYHDS 474 L + +P++ ++++K S Sbjct 431 SLTLVPLLPNEEHIEKLKNKETS 453 Lambda K H 0.325 0.139 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 206856738528 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40