bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1166_orf1
Length=484
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0172 449 8e-125
> 5833.PF11_0172
Length=455
Score = 449 bits (1156), Expect = 8e-125, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 307/443 (69%), Gaps = 5/443 (1%)
Query 32 VQAAAGTGETSDGLLPHLADSHFWKKLSFTQFVIYLVGFSEGLTHLAALAIYYMLKDDLG 91
V+ GE LP L++ K FTQ V+YLVG S+GLTHLA+LAIYY+ KD
Sbjct 16 VERTKSNGEG----LPLLSEKT-KKGFDFTQIVVYLVGLSDGLTHLASLAIYYLFKDYFR 70
Query 92 LSPAEVSALFIAPALPWVFKPIFAFISDSYPLYGSRRKPYMIAFSLLEGLGFIMLGTFPT 151
L+P +VS + + P +P++ KP+ A I+DS+ ++G RRKPY+ FSL + L F+ L
Sbjct 71 LTPYQVSLILMYPYIPFILKPVIALITDSFSIFGMRRKPYLFLFSLFQSLNFLALAFLNL 130
Query 152 HILTALLSLFIISISAAFCSAVAEALVVETTAGRSMDQSAENVSDFITAKAVGSLIVAYL 211
++ A L LF IS+ A+FC+ VAEALVVE++ G++ Q V++FI +KA+GSL VAY
Sbjct 131 SVIQASLILFFISLCASFCTTVAEALVVESSMGQTYSQGTNKVTEFIASKAIGSLSVAYF 190
Query 212 SGYLLERTSKQSIFLATSIFPLFIALITTFMTDEGGAPSYDMKTQLRLLMEFLKQSVIWG 271
SGY LE+ ++ IF+ATSIFPL I+L F+ ++ + + ++ QL L++F+ + G
Sbjct 191 SGYFLEKMPREYIFIATSIFPLIISLSCLFLKEKEYSTNRNIFNQLSDLIKFINTPIFLG 250
Query 272 PALYIFAYMAGPDYDDALFFYFTNKLGFSPTFMGTLRFTYGIAALVGVVMYRTFFKRTGF 331
P LYIF YM+GPDYDDA FF+ TNKLGF P+FMGTLR TYGIA+L+G+++YR F K
Sbjct 251 PFLYIFVYMSGPDYDDAFFFFCTNKLGFRPSFMGTLRLTYGIASLIGIIIYRVFLKNCSL 310
Query 332 RKTLLATILVAVPIYLSPIILTTGFNRTLGISNKAFVLSGGFLIEATAEIQLLPLLVLTA 391
RKTL+ T LV+ PIY+SPIILT N+ LGISN+ FVLSGGFLIEA EIQLLPL +LTA
Sbjct 311 RKTLIITTLVSFPIYISPIILTEHINKFLGISNELFVLSGGFLIEAITEIQLLPLFILTA 370
Query 392 SICPPGLEGSVYAMMMSVRNTGAMASRGISAILTYMAGITSSNFTHLTGYIMLCGASLLI 451
+IC PGLE SV+A ++SV+N G++ +G S+ +TY+ I S NF +L+ YI+ CG LL
Sbjct 371 NICQPGLEASVFATILSVKNLGSLTKKGTSSFITYLMKIDSYNFDNLSLYILTCGFFLLF 430
Query 452 PLIFLEYVPDDAEVQRVKQYHDS 474
L + +P++ ++++K S
Sbjct 431 SLTLVPLLPNEEHIEKLKNKETS 453
Lambda K H
0.325 0.139 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 206856738528
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40