bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1163_orf2 Length=203 Score E Sequences producing significant alignments: (Bits) Value 5270.UM05915.1 112 7e-24 > 5270.UM05915.1 Length=361 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 26/192 (13%) Query 13 TELCCHPFRCGRFLFMHNGNVGGFNRIRRDLLSLLPDPMFSFAITNSCIDSACLFAVFLA 72 +E CHP+R GR ++MHNG + F++I+R +L+ LP+P+F F ++ DS FAVFL+ Sbjct 105 SETNCHPWRYGRLMWMHNGQISEFSKIKRKVLASLPEPLFLFPQGHT--DSEFAFAVFLS 162 Query 73 LLPNS-PTEPSTHSAMKDAVEQMIATICWLLDREKIEETTLINIVVSDGESIVATRFVTN 131 L + TEP + ++DA+ I I E +L+N V+DG+SI+ TR+V++ Sbjct 163 HLGDPLQTEPFCYKELRDAMLATINDFNTWAREAGIREPSLMNFCVTDGQSIICTRYVSS 222 Query 132 AQEVAYVSGKSSIVPDPTGETSPTMPPSLYFATGTAWQQQEDACDEYRMTHKDKRTDICI 191 + A SLYF++GT++ E + YRM DKR I + Sbjct 223 KHDQA---------------------ASLYFSSGTSF--YEHSPGTYRMVKTDKREKIIV 259 Query 192 VTSEPLTSNPED 203 V SEPLT D Sbjct 260 VASEPLTFEKAD 271 Lambda K H 0.319 0.133 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 49612009869 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40