bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1067_orf1
Length=250
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI0180w 477 1e-133
> 5833.PFI0180w
Length=453
Score = 477 bits (1228), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 234/250 (93%), Positives = 245/250 (98%), Gaps = 0/250 (0%)
Query 1 GKEDAANNFARGHYTIGKEIVDLSLDRIRKLADQCTGLQGFLMFNAVGGGTGSGLGCLLL 60
GKEDAANNFARGHYTIGKE++D+ LDRIRKLAD CTGLQGFLMF+AVGGGTGSG GCL+L
Sbjct 95 GKEDAANNFARGHYTIGKEVIDVCLDRIRKLADNCTGLQGFLMFSAVGGGTGSGFGCLML 154
Query 61 ERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICR 120
ERLSVDYGKKSKLNFC WPSPQVSTAVVEPYNSVLSTHSLLEHTDVA+MLDNEAIYDICR
Sbjct 155 ERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICR 214
Query 121 RNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNPVPYPRIHFILSSYAP 180
RNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTN VPYPRIHF+LSSYAP
Sbjct 215 RNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 274
Query 181 IISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT 240
++SAEKAYHEQLSV+EITNSAFEPA+MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT
Sbjct 275 VVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT 334
Query 241 IKTKRTIQFV 250
IKTKRTIQFV
Sbjct 335 IKTKRTIQFV 344
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 75630515125
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40