bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1063_orf1 Length=126 Score E Sequences producing significant alignments: (Bits) Value 243164.DET0057 60.1 2e-08 > 243164.DET0057 Length=824 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 0/91 (0%) Query 1 IFEPLTDNAMRGVLDLMFSHLIKELNKKGIKLEVTNSAKEFILGRAWSHKFGGRRMAKYI 60 +F L +R ++DLM +IK++++KGI LEVT+SAK+ + + + +G R + + I Sbjct 718 VFHSLNKEQIRSIVDLMLKSVIKQMSEKGIGLEVTDSAKDLLGKKGYDEVYGARPLRRTI 777 Query 61 EKYITAKIAPLLLSAKLRRGHKAQLKRAPNQ 91 + + +++ LL AK G K + A ++ Sbjct 778 QTMLEDRLSEDLLRAKFEAGDKVIVDTAEDE 808 Lambda K H 0.320 0.135 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22588795449 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40