bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1002_orf1 Length=182 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000006811 282 4e-75 > 69293.ENSGACP00000006811 Length=149 Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 139/149 (93%), Positives = 145/149 (97%), Gaps = 0/149 (0%) Query 34 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 93 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG Sbjct 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60 Query 94 NGTIDFPEFLTLMARKMKDTDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDE 153 NGTIDFPEFLT+MARKMKDTDSEEE+ EAF+VFD+DGNG ISAAELRHVMTNLGEKLTDE Sbjct 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 120 Query 154 EVDEMIREADIDGDGQINYEEFVGMMLAR 182 EVDEMIREADIDGDGQ+NYEEFV MM A+ Sbjct 121 EVDEMIREADIDGDGQVNYEEFVQMMTAK 149 Lambda K H 0.313 0.133 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 38282551062 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40