bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0951_orf4
Length=299
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF1315w                                                        172    9e-42


> 5833.PFF1315w
Length=1712

 Score =  172 bits (437),  Expect = 9e-42, Method: Composition-based stats.
 Identities = 96/293 (32%), Positives = 150/293 (51%), Gaps = 45/293 (15%)

Query  3     GDPNSRGHNSYTPTLMAYQLNPKWLPLFLEAGAGAEKGKRWVLTDVLSCAVAKNDVDSIG  62
              +PN   HN +TP L+AY LN  W+  F++AGAG +   R +LT+VLSCA+ KND+ ++ 
Sbjct  1382  ANPNWCYHNKFTPILLAYNLNKAWVNHFIDAGAGEKPCDRHILTEVLSCAIFKNDLSTVQ  1441

Query  63    LLIDKYPDLMNRTHPLWSKPLLQAAKQGRVQVLELLLASGCNV--DARGEGGQTALLAAT  120
             LL+ KYP L+ + H LWS P +QAAK  R+ +L+ L +    +      E   + +  A 
Sbjct  1442  LLLKKYPQLIQKGHNLWSLPFIQAAKLERLNILKYLYSVKKEIINQLDAENVLSPIHVAA  1501

Query  121   EEGLGSCVERLIDHGADVNKANFEGMTPLIVACMENHEDMVNYFLDHTQEPYGVKVHPNS  180
             EEG    ++ L+++  ++N  N      L +AC+EN E +V+Y L H             
Sbjct  1502  EEGHVEVLKFLLENEVNINLTNKYHQNALHIACLENQEKIVHYLLSHN------------  1549

Query  181   LQQQPHLQVVENAQGERACEGRWILATQTQVLDCNKAEKTEGETPLLVCIRLRNDKIAKT  240
                                            +D N  +   GE PL++CIR RN+ +A  
Sbjct  1550  -------------------------------IDINCKDNINGECPLMICIRTRNENLALL  1578

Query  241   ILKKAKSIDLEAKDSQGRTALLAALFFGQYSVAATLMEMGADVMTQDDAGNTA  293
             IL + K+I+    +  G T+L+ ++F+G Y VA  LM+ GADV  +D  G+ +
Sbjct  1579  ILNEGKNINYNLTNIHGETSLIYSIFYGLYDVADILMKRGADVSVRDINGDKS  1631



Lambda     K      H
   0.316    0.132    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 103213341868


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40