bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0870_orf1 Length=269 Score E Sequences producing significant alignments: (Bits) Value 167539.Pro1107 113 6e-24 > 167539.Pro1107 Length=856 Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 129/241 (53%), Gaps = 41/241 (17%) Query 1 FDEVENAHKNLWSLLLPMLDEGHLSDSKGNRVDFTNCLIILTSNIGQQFILEGYKEARAL 60 FDE+E AH ++++LLL +L+EG L+DSKG VDF N LII+TSNIG + I Sbjct 647 FDEIEKAHPDVFNLLLQLLEEGRLTDSKGRTVDFKNTLIIMTSNIGSKVI---------- 696 Query 61 SGSNEKGGAADAAATGGAEDGSSGKGSGASSVGGFKGTGKSPKDV-LRRMRQKVLKEVFG 119 EKGG GG GF+ G+S +D R++ V +E+ Sbjct 697 ----EKGG-------GGL---------------GFEMAGESVEDSQYNRIKSLVNEELKQ 730 Query 120 YFKPQVIGRMSEIIIFEPLNDQALKGVLGLKLSSLTKGLAARGVDFKVADSAMTYILERA 179 YF+P+ + R+ EII+F L +K + + L + + +G+ V+++ ++E Sbjct 731 YFRPEFLNRLDEIIVFRQLTRMEVKDIAEIMLKEVFSRIKDKGITLSVSEAFKERLVEEG 790 Query 180 ASYKYGGRRMGKYLEKYIKPRVAPLLISGKLKRGDRAVLARSNTNPNQLNLIVCELDESG 239 + YG R + + + + ++ +A ++SGK+K GD+A + + + N+ N+IV +D++ Sbjct 791 YNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKDGDQAEV---DIDENK-NVIVKHIDKNS 846 Query 240 N 240 N Sbjct 847 N 847 Lambda K H 0.314 0.135 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 86166200835 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40