bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0867_orf1
Length=136
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5807.cgd8_840                                                        272    2e-72


> 5807.cgd8_840
Length=406

 Score =  272 bits (696),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 127/136 (93%), Positives = 135/136 (99%), Gaps = 0/136 (0%)

Query  1    KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP  60
            KGVLLYGPPGTGKTLLARAMAS+M+CNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP
Sbjct  185  KGVLLYGPPGTGKTLLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP  244

Query  61   CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP  120
            C+IFMDE+DAIGG+RFSQGTSADREIQRTLMELLNQLDGFDELG VKIIMATNRPDVLDP
Sbjct  245  CVIFMDEIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDP  304

Query  121  ALMRPGRLDRKIEIPM  136
            AL+RPGRLDRK+EIP+
Sbjct  305  ALLRPGRLDRKVEIPL  320



Lambda     K      H
   0.323    0.140    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22513421946


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40