bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0861_orf3 Length=139 Score E Sequences producing significant alignments: (Bits) Value 9606.ENSP00000371148 84.0 1e-15 > 9606.ENSP00000371148 Length=2426 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 5/141 (3%) Query 3 DGCVLAGSVLDGCVLAGSVLDGSVLAGSVLAGSVLAGSVLAGSVLAGSVLAGSVLAGS-- 60 + +LA + ++ +LA + +D +LA + + +LA + + +LA S + +LA S Sbjct 712 ESHILASNTMETHILASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLATSSM 771 Query 61 ---VLAGSVLDGSVLAGSVLAGSVLAGSVLAGSVLAGSVLDGSVLAGSVLDGSVLAGSVL 117 +LA S +D +LA S + +LA S + +LA S +D +LA S +D +LA S + Sbjct 772 DSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSM 831 Query 118 DGCVLDGCVLDGCVLAGSVLD 138 D +L +D +LA S +D Sbjct 832 DSQMLATSTMDSQMLATSTMD 852 Lambda K H 0.317 0.138 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23001752095 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40