bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0792_orf1 Length=188 Score E Sequences producing significant alignments: (Bits) Value 5833.PF07_0072 265 7e-70 > 5833.PF07_0072 Length=528 Score = 265 bits (676), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 127/179 (70%), Positives = 152/179 (84%), Gaps = 1/179 (0%) Query 8 DNLAATPGMFVQHSTAAFSDRYKGQRVLGKGSFGEVILCKDKITGQEYAVKVISKRQVKQ 67 +N PGMF+Q+S F+++YKG ++LGKGSFGEVIL +DK TG EYA+KVISK+ VK+ Sbjct 49 NNSKLRPGMFIQNSNVVFNEQYKGIKILGKGSFGEVILSRDKHTGHEYAIKVISKKHVKR 108 Query 68 KTDKELLLKEVELLKKLDHPNIMKLYEFFEDKGYFYLVTEVYTGGELFDEIINRKRFSEA 127 KTDKE LL+EVELLK LDH NIMKLYEFFED Y+YLV++VYTGGELFDEII+RKRF E Sbjct 109 KTDKESLLREVELLKMLDHINIMKLYEFFEDNNYYYLVSDVYTGGELFDEIISRKRFYEI 168 Query 128 DAARIVRQVLSGINYMHRNKIVHRDLKPENLLLENK-KKDANIRIIDFGLSTHFEPQKK 185 DAARI++Q+LSGI YMH+N +VHRDLKPEN+LLE K K+D I+IIDFGLSTHFE KK Sbjct 169 DAARIIKQILSGITYMHKNNVVHRDLKPENILLETKNKEDMIIKIIDFGLSTHFEYSKK 227 Lambda K H 0.318 0.137 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 41203474075 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40