bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0791_orf1 Length=154 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL0185c 104 1e-21 > 5833.PFL0185c Length=359 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 73/94 (77%), Gaps = 0/94 (0%) Query 19 IEWYKEKDITKKIIIRKQRNKKTKQIRTITETVNNNSFFNLFNCHDIPSDDKLQQMDEKE 78 I+WY K+I KK +++KQ NK +++++T+ +TVN +SFF+ F H +P+ + ++Q+ + E Sbjct 200 IDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKVPNSNVIKQLSKHE 259 Query 79 VEELQMVVEADYDIGITIRDKIIPRAVEWYLGQV 112 V +L+M++E DY++ +TI+++IIP AV++YLG + Sbjct 260 VAQLEMIIEGDYEVALTIKERIIPYAVDYYLGII 293 Lambda K H 0.312 0.131 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23121682173 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40