bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0767_orf4 Length=291 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000001107 143 8e-33 > 51511.ENSCSAVP00000001107 Length=1625 Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/250 (38%), Positives = 129/250 (51%), Gaps = 25/250 (10%) Query 1 KCTCITGYAGDGHGEAGCQDIDECAEENICGSNAVCTNTAGSYQCACREGFVASAEQQQQ 60 +C C++GY G+G C DIDECA+ ++C NA C+N+ G Y C+C GF + Sbjct 143 RCICLSGYTGNG---TVCNDIDECADSSLC-PNAACSNSEGGYSCSCLTGFTLANSS--- 195 Query 61 GTPALVCVDVDECSDASKNTCAKPADGGICTNTEGSYECACKPGYQGDGHSCADINECT- 119 C ++DEC + N C+ A C +T GS+ C+C PG+ GDG +C DINECT Sbjct 196 ------CTNIDECVSPNLNNCSSNA---TCNDTRGSFTCSCNPGFTGDGENCTDINECTL 246 Query 120 AQGTCGEHTTRKNTPGSFQCDCVEGFERADERTCRDINECETGAVVLPPNSTCVNTEGSY 179 C + T N GSF C C GF D C DINEC +G N+TC + +GS+ Sbjct 247 GTQNCHANATCTNNIGSFTCSCNTGF-TGDGVNCTDINECTSGTHNCHANATCTSKDGSF 305 Query 180 DFDCVAGYRRTDGACVKIDFCKE--KGCNANATCRENDAGTEAICTCKEGYEGSGEGEDG 237 C AG+ C I+ C C+ANATC N C+C G+ G GE Sbjct 306 TCSCNAGFTGDGVNCTDINECTSGTHNCHANATCNNNIG--SFTCSCNPGFTGDGE---N 360 Query 238 CQNINECERG 247 C +INEC G Sbjct 361 CTDINECTLG 370 Lambda K H 0.315 0.131 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 98412721316 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40