bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0757_orf1
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0346 380 1e-104
> 5833.PF14_0346
Length=853
Score = 380 bits (976), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 174/209 (83%), Positives = 188/209 (89%), Gaps = 0/209 (0%)
Query 1 NDHPFIIRLVRTFRDKDFLYFLTELVTGGELYDAIRKLGLLGRYQAQFYLASIVLAIEYL 60
NDHPFIIRLVRTF+D + YFLTELVTGGELYDAIRKLGLL + QAQFYL SI+LAIEYL
Sbjct 596 NDHPFIIRLVRTFKDSKYFYFLTELVTGGELYDAIRKLGLLSKSQAQFYLGSIILAIEYL 655
Query 61 HERNIAYRDLKPENILLDSQGYVKLIDFGCAKKMQGRAYTLVGTPHYMAPEVILGKGYTL 120
HERNI YRDLKPENILLD QGYVKLIDFGCAKK+QGRAYTLVGTPHYMAPEVILGKGY
Sbjct 656 HERNIVYRDLKPENILLDKQGYVKLIDFGCAKKVQGRAYTLVGTPHYMAPEVILGKGYGC 715
Query 121 TADTWAFGVCLYEFMCGPLPFGNDAEDQLVIFRDILAGKLMFPHYVTDQDAINLMKRLLC 180
T D WA G+CLYEF+CGPLPFGND EDQL IFRDIL G+L FP YVTD D+INLMKRLLC
Sbjct 716 TVDIWALGICLYEFICGPLPFGNDEEDQLEIFRDILTGQLTFPDYVTDTDSINLMKRLLC 775
Query 181 RLPEVRIGCSINGYKDIKEHAFFSDFDWD 209
RLP+ RIGCSING+KDIK+H FFS+F+WD
Sbjct 776 RLPQGRIGCSINGFKDIKDHPFFSNFNWD 804
Lambda K H
0.328 0.147 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 53286973563
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40