bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0736_orf2 Length=193 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0155 250 2e-65 > 5833.PF14_0155 Length=572 Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/191 (60%), Positives = 143/191 (74%), Gaps = 1/191 (0%) Query 1 LLQKERSKARNCWIVIESVYSMEGDIADLPVVRSLADSFNAKIICDEAHGLGILGATGRG 60 LL K R K RNCW+ IESVYSM+GDI LP + L AK+ DEAHGLG+LG TGRG Sbjct 319 LLIKYRYKYRNCWVCIESVYSMDGDIPHLPTFKKLCIQHKAKLYVDEAHGLGVLGKTGRG 378 Query 61 LEEYFNMPGACEVLCGTFSKSIGGVGGFITCKRPLVDFMDFHAPGSVFSASLTAYSAGGA 120 +EE+FNMPG +++ GTFSKSIGGVGG+I +++F+DFH G+VFSA L AY AGGA Sbjct 379 IEEHFNMPGTADIIVGTFSKSIGGVGGYIVASDEVIEFLDFHCIGNVFSAPLPAYCAGGA 438 Query 121 LKAFELMTGTQQWRIQKAQENARYLRHLIETGDGHWPADYPEELKYEVEGMSCTTVIPVV 180 LKAFEL+ TQ WRIQK + N +YLR+ ++TG GHWP DYPE KY +EG T+VIPV+ Sbjct 439 LKAFELI-DTQPWRIQKLKFNTKYLRNGLKTGMGHWPKDYPESYKYIIEGDDATSVIPVI 497 Query 181 FPNSPQRMFRI 191 FPN P R+F+I Sbjct 498 FPNDPDRLFKI 508 Lambda K H 0.321 0.137 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 44278360200 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40