bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0696_orf2 Length=205 Score E Sequences producing significant alignments: (Bits) Value 5833.PF07_0078 164 2e-39 > 5833.PF07_0078 Length=462 Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 5/194 (2%) Query 7 ECKVNYTDMDGD-VSLKIDASTCTDTSITEITGDVLLYYELSNYFQNHRHFMKSRSDKQL 65 ECK++Y + + + L+I+ + C + ++YEL N++QNH+ ++ S+S QL Sbjct 196 ECKISYGEYNTSPLVLEINENNCKGPK-RPFKKNAYIFYELHNFYQNHKKYLVSKSHNQL 254 Query 66 EGKVYTAASEVRTACDPRVESSDGRVLHPCGLSAGSVFTDVFSAVEEDEITE-IELDESR 124 G VYT +EV + C P ++ +G++LHPCGL A S+F D FS + E+ I+LDES+ Sbjct 255 MGTVYTKDNEV-SQCGPITKNHEGKILHPCGLIARSIFNDTFSVYMDRELHNMIKLDESK 313 Query 125 EAICWDWDLSTFKNPSSEEINAAAPQVDFWLFNQTYASALLMDKPGVGWGVENSHFIVWV 184 E I W D + FKNPS E+ VDFWL N+ Y +AL M+ G+GVENSHFIVW+ Sbjct 314 EGITWYSDYNKFKNPSDSEMELHKSHVDFWLMNEKYKNALNMNNEN-GYGVENSHFIVWM 372 Query 185 RESPLPVFRKVYGR 198 + + L FRK Y + Sbjct 373 KTAALSEFRKKYAK 386 Lambda K H 0.317 0.132 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 50836997767 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40