bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0694_orf1
Length=141
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  338969.Rfer_2623                                                     188    5e-47


> 338969.Rfer_2623
Length=292

 Score =  188 bits (477),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 86/140 (61%), Positives = 112/140 (80%), Gaps = 0/140 (0%)

Query  2    ELTAGLAVVRERAARLPRRPRVYFEEWDEPQISGIRWVSELIGIAGGEDCFAELSVESLG  61
            E+   L+V+ + AA LPRRP++YFEEWD P IS I+WVSELIGIAGG+DCF EL+ +S+G
Sbjct  142  EMQRQLSVIADAAAALPRRPKIYFEEWDVPHISAIQWVSELIGIAGGDDCFPELAAQSMG  201

Query  62   RNRIIADPLEVPRRAPDIILGSWCGKKFQPSQVAARAGWERIPAIRDGFVREVKSAIILQ  121
            +NRIIAD  E+ RR PDII+GSWCGKKF+P  VAARAGW  + A++ G + E+KSA ILQ
Sbjct  202  KNRIIADGAEIVRRNPDIIIGSWCGKKFRPENVAARAGWGEVNAVKTGQLFEIKSADILQ  261

Query  122  PGPAALTEGVQAIQQVIEEW  141
            PGPAALT+GV  + +++ +W
Sbjct  262  PGPAALTDGVAQLHRIVMDW  281



Lambda     K      H
   0.320    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22827922775


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40