bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0653_orf2 Length=173 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_3280 210 2e-53 > 5807.cgd8_3280 Length=828 Score = 210 bits (534), Expect = 2e-53, Method: Composition-based stats. Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 10/183 (5%) Query 1 HFGHESWNMVINIMVGIRLAGARAMSEPHRAVEPYDFLMKEKFSVLPKTGMVDKKRR--- 57 + GHESWN V+N+MVG+RLA R SEP+R V YDF+MKEKF ++P+T + Sbjct 438 YIGHESWNTVLNMMVGMRLAIGRVYSEPNRDVADYDFIMKEKFFIIPRTSRESNTKSNVL 497 Query 58 -------KPSLCAVRFIDYAPMVFRRLRALFGIDSLCYIRSVGPDQLLGNLILGNLSSLS 110 + + V+FIDY PMVFR++R + I Y+RSVGP+QLLGN++LGNLSS++ Sbjct 498 IQKSNDYRGFMKPVQFIDYNPMVFRKIREICNISPESYVRSVGPEQLLGNMVLGNLSSMN 557 Query 111 ELVSEGKSGSLFYYTTDGRFMIKTVSKETAFFMRSILFDYYKHVSTCTNTMLTRLCGLHA 170 EL SEGKSG+ FYYTTDGRF+IKTV K+TA F RSIL Y+ H+ + N+++TR+ GLHA Sbjct 558 ELCSEGKSGAFFYYTTDGRFLIKTVGKKTAVFFRSILSKYFNHIKSNQNSLITRIYGLHA 617 Query 171 LRL 173 LR Sbjct 618 LRF 620 Lambda K H 0.327 0.140 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 33476963958 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40