bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0634_orf2 Length=415 Score E Sequences producing significant alignments: (Bits) Value 33169.AGOS_AFR377C 66.6 1e-09 > 33169.AGOS_AFR377C Length=726 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 25/197 (12%) Query 237 LYTRRMPEKVWLRLAFAEMIYGLWGMHKRGWVHRDIKGCNYFVSQDGHALLADFEGFWRN 296 L +R+ + W R +++ + +H G +HRD+K N + ++G ++ADF + Sbjct 102 LRRQRVFSEAWARHYMCQLVDTVEYIHSMGVIHRDLKPENVLLDKEGRLMIADFGAAYTV 161 Query 297 GMH-AIMYGEEVEIIF--TEHYIAPELTFDGEYQVFDYKTDVFALGI------------- 340 G A G++ F T Y++PEL + + Y +DV+ALG Sbjct 162 GQSDAGSDGDKPATSFVGTAEYVSPELLLENKSY---YSSDVWALGCMLYQFLQGTPPFR 218 Query 341 ------TFKEMLEWMGNLEVPHRDLAEDLIRHMTDPDTKNRYDLMQCMQHPYFEGMDFDL 394 TF++++ +P LA L+ + D RY L Q +H +F G+D++ Sbjct 219 GQNEMETFEQIVNLDYTWRIPANPLAAGLVSKILVLDPSQRYTLEQIKKHKWFSGVDWNN 278 Query 395 VEKKMYGKAFEGTYQTP 411 EK G + TP Sbjct 279 KEKIWRGSWTIASESTP 295 Lambda K H 0.319 0.138 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 167601028060 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40