bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0610_orf3 Length=416 Score E Sequences producing significant alignments: (Bits) Value 3702.AT1G09270.1 506 7e-142 > 3702.AT1G09270.1 Length=538 Score = 506 bits (1302), Expect = 7e-142, Method: Compositional matrix adjust. Identities = 256/418 (61%), Positives = 313/418 (74%), Gaps = 7/418 (1%) Query 2 LEGVDLQQLVQALASGVPDAELEGTQLFRRALSLENNPPIQEVIDAGAVPHFVRFLSMHG 61 LEG+ + +VQ + S P A+LE T FR+ LS+E +PPI EVI AG +P FV FL H Sbjct 78 LEGIPM--MVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPRFVEFLGRHD 135 Query 62 RYQLQFEAAWALTNIASGTQEQTRVVVECGAIPLFVELLRCPKEEVREQAVWALGNIAGD 121 QLQFEAAWALTN+ASGT + TRVV+E GA+P+FV+LL ++VREQAVWALGN+AGD Sbjct 136 HPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGD 195 Query 122 SPSCRNLVLDGGALPPLLEQLNTPGSKVAMLRNATWTLSNLCRGKPAPVFEKVSPALPAL 181 SP+CRNLVL+ GAL PLL QLN SK++MLRNATWTLSN CRGKP FE+V PALP L Sbjct 196 SPNCRNLVLNYGALEPLLAQLNE-NSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPIL 254 Query 182 AVLIYSDDAEVLTDACWALSYLSDGPNDRIKAVLEAGVCARLVELLSHQSNLVQTPALRA 241 LIY +D EVLTDACWALSYLSDGPND+I+AV+EAGVC RLVELL HQS V PALR Sbjct 255 RQLIYLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRT 314 Query 242 VGNIVTGDDTQTQVVLTCGALPKLLTLLSST-KKNVQKEACWTVSNITAGNKDQIQEVLD 300 VGNIVTGDD+QTQ ++ G LP L LL+ KK+++KEACWT+SNITAGNK QI+ V+ Sbjct 315 VGNIVTGDDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVG 374 Query 301 SGAIPALLHLLETADFDTKKEAAWAVSNAVSGGTDMQVALLVEKGCIPPLCSLLGCMDNK 360 +G I L+HLL+ A+FD KKEAAWA+SNA SGG+ Q+ LV +GCI PLC LL C D + Sbjct 375 AGIILPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPR 434 Query 361 IIMVALEALNAILRTGKKIKETEGLS--VNPYATLIEQADGATALEKLQDSTNENVFK 416 I+ V LE L IL+ G+ KE GL+ VN YA +IE++DG +E LQ N +++ Sbjct 435 IVTVCLEGLENILKVGEADKEM-GLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYE 491 Lambda K H 0.316 0.132 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 168191172525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40