bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0607_orf1
Length=110
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFL0650c                                                        113    2e-24


> 5833.PFL0650c
Length=576

 Score =  113 bits (282),  Expect = 2e-24, Method: Composition-based stats.
 Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 0/109 (0%)

Query  2    IIDQYAGEPPCPRWKHAAAFFDNRLWIMGGTYAGWFKNYVMSDLYVFDFSARVWFRCDVN  61
            ++   +GE PCPRWKH A  FD  +WI GG  +GWF NY + DLYV+D  +  WF C + 
Sbjct  350  LMKNSSGEAPCPRWKHGAVIFDKNMWISGGLCSGWFSNYSIPDLYVYDIPSNCWFNCQIA  409

Query  62   PTDLGFHTDVGPLTVLPANRAIYIFGGADQRGYPCADVYRLAPVCTTVS  110
               +    D G L +    +A ++FGG +    P ++V R AP+CT VS
Sbjct  410  SKQIHNCYDYGTLNLHSQTKAFFLFGGKNANNDPTSNVCRFAPLCTNVS  458



Lambda     K      H
   0.328    0.144    0.510 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23096258976


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40