bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0595_orf1 Length=179 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_4170 176 4e-43 > 5807.cgd5_4170 Length=445 Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 83/178 (46%), Positives = 122/178 (68%), Gaps = 0/178 (0%) Query 1 TVLVYLRKQNKLFTAHVGNSRAVLCKMNRYGCGVRAVDLTVDHTPTNNKELRRIVKAGGQ 60 TV+++L +N++ AHVG+SR+VL + +R G + AVDLT DH P + E RRI+ AGGQ Sbjct 266 TVILHLPLENRIIAAHVGDSRSVLARWSRSGRVLEAVDLTNDHKPNSESEKRRIIAAGGQ 325 Query 61 VRALGGDGLHRIFLTSGCLPGLAVARSIGDTLAGGAGVISLPEIREYKIDAKRDKFLLLC 120 V+ + GD +R+F+ PGLA++R+IGDTL AG+I P+I ++I ++D F+L+C Sbjct 326 VKRIEGDIPYRVFIKGKMYPGLAMSRAIGDTLGYQAGIIPEPDINTFQIQPEKDAFILIC 385 Query 121 TDGVWNVLSSQEAVEIANSAEQQEWRTAPEELARESWRRWINEEQIFADDMTVLFLKL 178 +DGVW +SSQEAV+I + + + E+LARE+WRRWI EE DD+TV + L Sbjct 386 SDGVWEFISSQEAVDIVAEGGSSDAQLSAEKLAREAWRRWIQEEGNVVDDITVQVIYL 443 Lambda K H 0.321 0.137 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 36430169559 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40