bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0593_orf6
Length=97
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5671.LinJ23.0060                                                     110    9e-24


> 5671.LinJ23.0060
Length=296

 Score =  110 bits (276),  Expect = 9e-24, Method: Composition-based stats.
 Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 4/89 (4%)

Query  13   PRVFMDIRVGDKPAKRLVIALYQDTVPRTVENFRSLCVGDK-KGENGEPLTFKKNTFHRI  71
            P+VF DI + +K A R+V+ LY DTVP+TVENFR+LC G+K KG +G+PL +K + FHR+
Sbjct  24   PKVFFDISIDNKAAGRMVMELYADTVPKTVENFRALCTGEKGKGRSGKPLHYKNSVFHRV  83

Query  72   IKNFMMQGGDI---NGKGGESIYGPQFND  97
            I NFM+QGGD    NG GGESIYG  F D
Sbjct  84   IPNFMIQGGDFTRGNGTGGESIYGTTFRD  112



Lambda     K      H
   0.320    0.142    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22472223870


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40