bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0588_orf1
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
51511.ENSCSAVP00000006588 106 2e-22
> 51511.ENSCSAVP00000006588
Length=218
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Query 1 VCVHGTYLWNWMSIRHLGLHRMHRNHIHFATGLPGEAAVLSGMRRNSEVAVYIHLEKAMK 60
V VHGTY NW I+ GLHRM R+HIHFA GLPG+ V+SGMR++S+V++Y+ LEKA+
Sbjct 126 VIVHGTYWENWDWIKEQGLHRMQRSHIHFAEGLPGK--VISGMRQSSQVSIYLDLEKALN 183
Query 61 EGAIFFKSRNGVVLTEG-LNGRLPPCFFSKVVLLR 94
+G FF+S N VVLTEG + GR+ P +F KV R
Sbjct 184 DGLKFFQSSNKVVLTEGDIYGRIHPKYFKKVEDCR 218
Lambda K H
0.328 0.141 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22990353331
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40