bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0579_orf1
Length=218
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFB0210c 179 4e-44
> 5833.PFB0210c
Length=504
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Query 2 SLFLARLYQGMAVGLATVCVPMYISEFSPDRYRGFYGTLHQLLITVGILVATLLGLAFGS 61
++ ARL G +GL TV VPMYISE + +G YG +HQL IT GI VA +LGLA G
Sbjct 129 TILFARLLSGFGIGLVTVSVPMYISEMTHKDKKGAYGVMHQLFITFGIFVAVMLGLAMGE 188
Query 62 PPTDTDFGYTVSTFQQCWWRFMLAFPAAVSIVAILLLWLVYPTESPHFLMHQGRKNTATA 121
P D +++F + WWR M FP+ +S++ IL L + + E+P+FL +GR +
Sbjct 189 GP-KADSTEPLTSFAKLWWRLMFLFPSVISLIGILALVVFFKEETPYFLFEKGRIEESKN 247
Query 122 LLKELLNKEDVSAEVQTIEVAICQQKVLEAESLSLGKATTYPAYRHVLLLAFFLSAFQQF 181
+LK++ ++V + I+ A+ Q + + SLSL A P+YR+V++L LS QQF
Sbjct 248 ILKKIYETDNVDEPLNAIKEAVEQNESAKKNSLSLLSALKIPSYRYVIILGCLLSGLQQF 307
Query 182 TGINILVANSNKLYASLNIDASLVTALTVV 211
TGIN+LV+NSN+LY +D+ L+T L+VV
Sbjct 308 TGINVLVSNSNELYKEF-LDSHLITILSVV 336
Lambda K H
0.326 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 57951013935
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40