bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0541_orf1
Length=159
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE1415w 70.1 2e-11
> 5833.PFE1415w
Length=406
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 36/156 (23%)
Query 4 EWLRCLPLLFLMIIVIYIDLVYILLHCLPQLQLSRPPALRDARRFQRGTYELVVFIALSF 63
+++R LP+ F+ I+++ I L+YI+ HCLP L + +RG E+ VF
Sbjct 108 KFVRLLPVFFIFIVLLGIYLIYIMYHCLP-LIYKDYKKVYLKYDLKRGIIEMGVFHFCLI 166
Query 64 LFLMSYWLSVITPAGSIPRTDQWTIKEEEEGEEEEGEEEGGGGGRGRGRRGRGGIRGGGQ 123
++L++Y LS+I GSIP T++W++ + +E E
Sbjct 167 MYLINYILSIIVSPGSIPDTEEWSLNDFQENNNINMENI--------------------- 205
Query 124 EGEEEEEEETPIANAIETKKGGGRRWCKWCKIYKPD 159
+E KK G RR CKWC YKPD
Sbjct 206 --------------LLEKKKSGERRHCKWCCKYKPD 227
Lambda K H
0.321 0.144 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 26246233818
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40