bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0479_orf1 Length=303 Score E Sequences producing significant alignments: (Bits) Value 351627.Csac_2055 261 1e-68 > 351627.Csac_2055 Length=864 Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 121/210 (57%), Positives = 167/210 (79%), Gaps = 2/210 (0%) Query 11 PTEERPDPEQIDLVVDDVARILSLWTGIPMGRMTEDEMTRILKLSEVLSKRVIGQDEAVQ 70 P E+R E++ +++A+I+S WTGIP+ ++ E E +IL+L ++L +RV+GQ+EAV+ Sbjct 526 PPEKRLLKEEV--TEEEIAKIVSKWTGIPVAKLVETERQKILELDKILHRRVVGQNEAVE 583 Query 71 AVANAIRNHRAGLSEDKKPIGAFLFLGSSGVGKTELAKALAEEIFLSEKNLIRLDMVEYQ 130 AV NAI RAG+ + +KPIG FLFLG +GVGKTELA+ALAE +F SE N+IR+DM EY Sbjct 584 AVCNAIMRARAGIKDPRKPIGTFLFLGPTGVGKTELARALAEALFDSENNMIRIDMTEYM 643 Query 131 EAHSISRLIGPPPGYMGNDEGGQLTEAVRQKPHSVVLFDEVENAHKNLWSLLLPMLDEGH 190 E HS+SRLIG PPGY+G +EGGQLTEAVR KP+SVVLFDE+E AH +++++LL ++D+G Sbjct 644 EKHSVSRLIGAPPGYVGYEEGGQLTEAVRTKPYSVVLFDEIEKAHHDVFNILLQIMDDGR 703 Query 191 LTDTKNVRVDFTNTIIIMTSNIGQQFILDG 220 LTD+K VDF NTIIIMTSN+G +++L+ Sbjct 704 LTDSKGRTVDFKNTIIIMTSNLGSEYLLNA 733 Lambda K H 0.312 0.132 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 105613652144 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40