bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0469_orf1
Length=140
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFL2225w                                                        110    2e-23


> 5833.PFL2225w
Length=204

 Score =  110 bits (274),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 79/123 (64%), Gaps = 0/123 (0%)

Query  15   YNERASGGKVSTTDAAVLARQLGLAPSYADVEKFEQENGSQLDYSTFQQFAAQSTHPEDN  74
            +NE++SGGK+S  +A+  AR+LGLAPS  D +K ++  G  L Y  + ++ +   H +DN
Sbjct  81   FNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYEQYLEYLSICVHDKDN  140

Query  75   IEDLVGAFAHFDPNGSGSLTVQQMRNILMTFGEPLTKEEMGVVESKFFSGTTVDYREFCT  134
            +E+L+  FAHFD N +G LT  QM+NIL T+G+ LT +E     + F S   +DY+ FC 
Sbjct  141  VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDNIDYKLFCE  200

Query  135  RVL  137
             +L
Sbjct  201  DIL  203



Lambda     K      H
   0.314    0.130    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22914837435


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40