bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0464_orf1 Length=299 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0114 325 1e-87 > 5833.PF11_0114 Length=392 Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 155/286 (54%), Positives = 201/286 (70%), Gaps = 10/286 (3%) Query 12 METPTVIIDNGSGFIKAGTNTDSSPSVFFPTVVGFPRRRFLHLFNDKPSQEKIFIGDKAV 71 ME T++IDNGSG+IKAG N+ P++ FPT+VG + ND+ ++I+ GD+A Sbjct 1 MENKTIVIDNGSGYIKAGINSSEEPTIVFPTIVGIEK-------NDET--KRIYTGDEAF 51 Query 72 ENRHQLTIVNPIDHGHIDDWEQMAYVWQHVYDVLGLNPSEHPCLLTEPPNCSSTHRNKLA 131 + L I PIDHGHI DW++ VW + + + + S LLTEPP CS +HR K+ Sbjct 52 FHESNLNIYRPIDHGHISDWDKAQKVWDYTLNCVDPSKSIKDILLTEPPLCSISHRKKMG 111 Query 132 ETLFEGFDAPEVCLGVTGLMAIYGTGQTTGLVVDIGEGVTQCVPVFDGYLEASSLRRSDF 191 E FE FD + L V+GLM++Y +G TTGLV+DIGEGVTQC+PVFDGY+E +S+ RSDF Sbjct 112 EIFFEYFDTLNLNLSVSGLMSLYASGLTTGLVLDIGEGVTQCLPVFDGYIEKNSIIRSDF 171 Query 192 GGEELQMYLQKILCDMGYQMTTRDDYEHVRVIKETLCFCSLDPASDQQRTDLDRTYHLPD 251 GGEEL M+LQK++CD+GY MTT E+V+ IKET+CFCSL+P+ DQ R DL TY LPD Sbjct 172 GGEELSMFLQKLICDIGYSMTTTKSLEYVKNIKETICFCSLNPSEDQLRNDLAATYTLPD 231 Query 252 GLTLRDGETTEITLGPERFYPAEALFNPQLCGRDNPSLTDLIWSSV 297 G LRDG + I + ERFY AEALFNPQLC RDN S+ D+IW S+ Sbjct 232 GDVLRDGYDS-IEIAHERFYVAEALFNPQLCHRDNLSIIDIIWKSI 276 Lambda K H 0.320 0.139 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 103213341868 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40