bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0446_orf3
Length=216
Score E
Sequences producing significant alignments: (Bits) Value
7165.AGAP004028-PA 180 2e-44
> 7165.AGAP004028-PA
Length=1212
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
Query 78 FPFTSFFSDAPQPLFPGEAAA-DAAVAESCFRYMDQMQQQLQDYRAFELLRTAGDRADFL 136
FPF FF DAPQPLF G A + +A SCFRY+ M +L+++RAFELLR+ DR+ +L
Sbjct 699 FPFARFFRDAPQPLFGGATYAENMDIARSCFRYVSHMFAELEEFRAFELLRSGLDRSKYL 758
Query 137 LTTHARMVAMTCTHAAITRERLVELNFTFDSLIIEEAAQILEVETFIPMLLQKAADKATR 196
L A+++AMTCTHAA+ R+ LV + F +D++++EEAAQILE+ETFIP+LLQ D R
Sbjct 759 LVKEAKIIAMTCTHAALKRKELVTMGFKYDNILMEEAAQILEIETFIPLLLQNPMDGYNR 818
Query 197 LKRVVLLGDHHQLPPIVKHM 216
LKR +++GDHHQLPP++K+M
Sbjct 819 LKRWIMIGDHHQLPPVIKNM 838
Lambda K H
0.317 0.129 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 56730992589
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40