bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0423_orf1 Length=198 Score E Sequences producing significant alignments: (Bits) Value 5833.PFF0520w 259 3e-68 > 5833.PFF0520w Length=509 Score = 259 bits (662), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 110/192 (57%), Positives = 151/192 (78%), Gaps = 0/192 (0%) Query 7 GEFVSTKAGTPYYVAPQVLEGRYDYRCDAWSLGVILYILLCGFPPFYGDTDAEVLAQVKA 66 GEF +TKAGTPYYVAPQVL+G+YD +CD WS GVI+Y LLCG+PPFYGDTD EVL +VK Sbjct 223 GEFTTTKAGTPYYVAPQVLDGKYDKKCDIWSSGVIMYTLLCGYPPFYGDTDNEVLKKVKK 282 Query 67 GAYSFAGPEWRRVSDEGKDLIRKLLKINPDERLSVEEALHHPWIMSLAQSSQNIPLPVTL 126 G + F +W +S + K+LI KLL NP+ER ++EEAL+HPWI + +S +++ L TL Sbjct 283 GEFCFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHEHVELSSTL 342 Query 127 MANLKGFRAQNRLKKAALTVIAQHMTDSDIDHLRKIFVSLDVDNSGTLSVQEVAEGLKRL 186 + NLK F+ +N LKK ALT+IA+H+ D +I++LR IF++LDVDNSGTLS QE+ +GLK++ Sbjct 343 LKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI 402 Query 187 GWREIPADLQAI 198 G+++IP D+ + Sbjct 403 GYQKIPPDIHQV 414 Lambda K H 0.320 0.137 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 46549540124 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40