bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0405_orf2 Length=83 Score E Sequences producing significant alignments: (Bits) Value 9258.ENSOANP00000024255 124 9e-28 > 9258.ENSOANP00000024255 Length=891 Score = 124 bits (311), Expect = 9e-28, Method: Composition-based stats. Identities = 56/83 (67%), Positives = 68/83 (81%), Gaps = 0/83 (0%) Query 1 RVKPEKGLFVFGNHYRPVPLKQTYVGIKDKKAIRRYNTMNDVTYEKVLECAGKNQVLIFV 60 RV P KGLF F N +RPVPL+QTYVGI +KKAI+R+ MN++ YEK++E AGKNQVL+FV Sbjct 643 RVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFV 702 Query 61 HSRKETVKTAKFICDAALQKDTL 83 HSRKET KTA+ I D L+KDTL Sbjct 703 HSRKETGKTARAIRDMCLEKDTL 725 Lambda K H 0.322 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22659344793 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40