bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0399_orf1 Length=137 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL8P1.142 63.2 2e-09 > 5833.MAL8P1.142 Length=265 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 6/113 (5%) Query 31 NSSSSSSRTEALLTPKAIASYTARTLYNKRCRFNPYWLSVVVAG-----YMGPPTGIHQQ 85 N+ S R E + TP+ SY +R Y ++ R +P + ++++AG Y + Sbjct 74 NNLSEKKRKEDMYTPQHYHSYVSRVFYVRKNRIDPLFNNIIIAGINSQKYDNNDDNVLLY 133 Query 86 QQQQQEQQQQEQQQQQGMAKA-GNEMYLGVADLLGTFFEEQVIATGLGRYFAI 137 + + +Q E + + + +++Y+G D+ GT F + I TG RYFA+ Sbjct 134 TNKNNDDEQNEYKNNEEYKEIHKDDLYIGFVDMHGTNFCDDYITTGYARYFAL 186 Lambda K H 0.315 0.128 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22428990562 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40