bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0385_orf1 Length=110 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_440 146 2e-34 > 5807.cgd8_440 Length=321 Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 64/110 (58%), Positives = 85/110 (77%), Gaps = 0/110 (0%) Query 1 KQKGLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGG 60 KQ + F GV + G+++H+EE +E+RRPFKC+LDVG+ TT GNRVF AMKGA DGG Sbjct 121 KQLNMDKIFTGVGEITGDDYHVEEEAEDRRPFKCILDVGLTRTTSGNRVFAAMKGATDGG 180 Query 61 LHIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110 ++IPHS RFPGFTKGE+GAEDS++ EV + RI G H++ YM ++E+DP Sbjct 181 IYIPHSPNRFPGFTKGENGAEDSFDAEVLKDRILGKHISNYMSEMQEDDP 230 Lambda K H 0.315 0.138 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23096258976 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40