bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0357_orf4 Length=374 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_580 505 7e-142 > 5807.cgd1_580 Length=752 Score = 505 bits (1301), Expect = 7e-142, Method: Compositional matrix adjust. Identities = 234/374 (62%), Positives = 301/374 (80%), Gaps = 2/374 (0%) Query 1 LSLIDLPGITRVPLKGSDQSDDIEALTRQMALRYAADPRTIILAVLPANADMSTSDALQL 60 L+LIDLPGITRVPLKGSDQ D+IE LTR MA+RYA DPRTIILAV+PANADMSTSDALQL Sbjct 68 LTLIDLPGITRVPLKGSDQCDNIEQLTRDMAIRYARDPRTIILAVIPANADMSTSDALQL 127 Query 61 ARRVDPRGVRTIGVITKVDLMDNGTDACKMLLGEEIPLRLGYTGVKNRSQADIKAGKSVQ 120 +RRVDP+G+RTIGV+TK+DLMD GTDA KML G+E+PLRLGYTGVKNRS AD+KAGKS++ Sbjct 128 SRRVDPKGLRTIGVVTKIDLMDRGTDASKMLHGDEVPLRLGYTGVKNRSSADLKAGKSIK 187 Query 121 SCLEDERQYFKTHPVYGHMGSQYWGIPSLVEKLTRVLFLHIKHVLPEIRKEIQLKARGVQ 180 LEDE +F THPVY ++ + G +LV KLT+VLF HI+ LP+IR+EI + R + Sbjct 188 DALEDEATFFSTHPVYRNLSPELVGTKNLVSKLTKVLFKHIRTFLPDIRREINARIRTLS 247 Query 181 SRIQELGEGVPSESRDRAQLLWTAITDYVEVIKSAIRGKYDKRLQKYFDQ--DQCLTIGS 238 SR+ E G+ VP ES DR QL+W ITDY E+IK+ IRGKYDKRLQ YFD D ++ G+ Sbjct 248 SRLDEFGQSVPLESSDRTQLMWAMITDYCEMIKNTIRGKYDKRLQTYFDHGSDGGMSSGA 307 Query 239 CIRHEYTSLLDEYCDRNISDDITDSQVETAIRLHEGESLPGFPSPDTFEHLILPYLKKLS 298 IR + LLDEY + +++ ++TD ++ AIR+HEG+S+PGFPSPD FE+LILP+L+K+ Sbjct 308 QIRVIFNELLDEYTENDVTSELTDYDIDAAIRMHEGDSMPGFPSPDMFEYLILPHLRKIQ 367 Query 299 PPVMDCLDRVAQTLESLAQRVAERVFCRFPALAERVLEISQEILIREKEATREILQHDVD 358 PVM+CLD+V LE+++Q+VA +VF RFP L++++L+ SQEIL++EKE T+ IL+ V+ Sbjct 368 APVMECLDKVTSALENVSQKVAHKVFSRFPKLSDQILDRSQEILLQEKENTKTILEQLVE 427 Query 359 AEMGYLFTNDERYL 372 AE GYLFTND +YL Sbjct 428 AETGYLFTNDSKYL 441 Lambda K H 0.320 0.137 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 144601168804 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40