bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0344_orf1 Length=119 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0630 152 4e-36 > 5833.PF14_0630 Length=889 Score = 152 bits (383), Expect = 4e-36, Method: Composition-based stats. Identities = 63/106 (59%), Positives = 82/106 (77%), Gaps = 1/106 (0%) Query 11 EHRDGRWDWVEAPCKKQHIMPEARFQHSVVFLDSKMVVIGGRTDGDCSKPLSTAVYDTEP 70 +HRDGRWDWVEAP KK PEAR+QH+ VF+ SK+ ++GGR D C+ PLSTA+Y+TE Sbjct 227 QHRDGRWDWVEAPIKKGS-PPEARYQHTSVFIGSKIFILGGRNDNGCAVPLSTALYNTET 285 Query 71 VEWRLLPSMGRFRHSSWTLRNTIFTFGGFGHSTQQHPTAELLFMDC 116 +EW LPS+ +FRH+SW + TI+TFGGF H TQQ+PT EL ++C Sbjct 286 IEWVTLPSISKFRHTSWVYKYTIYTFGGFSHQTQQYPTNELECLEC 331 Lambda K H 0.323 0.136 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22381075488 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40