bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0321_orf4 Length=681 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_810 141 1e-31 > 5807.cgd1_810 Length=600 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 154/316 (48%), Gaps = 53/316 (16%) Query 228 QLSVSRRFEVFLDTRLGKGGNGEVFLAIDRRHGAPVAIKREPKEMLRHEYTLICDIRIEG 287 Q + + + VF + LGKGGNGEVFL ++R VA+K E L E + Sbjct 183 QEDMGKSYLVFTEASLGKGGNGEVFLGLNRETFEFVAVKSEMSGSLSREADYL------- 235 Query 288 SLLTYKAQDPHPSKFLGLMAHSVALEVGNSAVAAAVAHHSAVGDTHDHLVLELVNGGELR 347 K + + K L + D ++L++EL +GG +R Sbjct 236 ----EKCKSDYVVKKLDWFQNRT--------------------DNREYLIMELFHGGTIR 271 Query 348 KLLKSKYSTGMPLEVARAYIYQIICSLVLIHSKCIVHRDLKTQNIL----VRHGDTFQND 403 +LL+ KY G+P+ R +Y ++ + +HSK +VHRDLKT N++ VR +T N Sbjct 272 QLLRFKYKNGLPINSVRNLMYTLLVGISQMHSKGVVHRDLKTANLMLTDVVRDINTC-NS 330 Query 404 ELKIIDFGNSTKVRPGLILTKNYTTCFACAPEQFIPNGKGYSYGVDVWAAGTIFFELLTG 463 ++KI D GNS + G L + TCFA APE ++ N Y VD+W+ GTI +EL+TG Sbjct 331 QMKICDLGNS-GMSIGGRLKGHCCTCFATAPEVYLNN--DYDEKVDMWSIGTILYELITG 387 Query 464 ERLFECLNM--SEASRQIPAFK----EKDVTDRLPF--------LRQDAMEFLLKCLTKD 509 +RL EC + A+ +I F EK + + + +D ++ L + L K Sbjct 388 QRLIECNHQIHCNANEKILRFDFSNIEKKINEHISTHYTFGDVNWVEDVIDLLRRLLEKS 447 Query 510 PQKRPTAFQLLTSPFL 525 P KR +A + L+ F Sbjct 448 PSKRISAQESLSHHFF 463 Lambda K H 0.321 0.137 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 316795403106 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40