bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0297_orf4 Length=176 Score E Sequences producing significant alignments: (Bits) Value 9606.ENSP00000371148 112 6e-24 > 9606.ENSP00000371148 Length=2426 Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 0/145 (0%) Query 4 DGCVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVL 63 + +LA + ++ +LA + +D +LA + +D +LA + +D +LA S +D +LA S + Sbjct 712 ESHILASNTMETHILASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLATSSM 771 Query 64 DGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVL 123 D +LA S +D +LA S +D +LA S +D +LA S +D +LA S +D +LA S + Sbjct 772 DSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSM 831 Query 124 DGSVLAGSVLDGCVEAGSVVAGAVL 148 D +LA S +D + A S + +L Sbjct 832 DSQMLATSTMDSQMLATSTMDSQML 856 Lambda K H 0.313 0.137 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 35336795289 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40