bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0267_orf1
Length=174
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_190 62.4 6e-09
> 5807.cgd2_190
Length=136
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query 43 NRR---GALSLGTEPRVCRSIMLFRSSPTNSWKFGFYVGDRLGAWRQKNAKVFCAETAKV 99
NR+ G LG + ++ F + F F G L K + F + K+
Sbjct 5 NRKIGLGCCGLGMILIILGVLLFFDKALLTIGNFTFVAGLTLVLGLSKVTRFFL-KPDKL 63
Query 100 ESIVALHPGVLLIALGYSLIGLPLQLYGLLRLFASFLPQVLGAVRLSPVGCWILQLPGFK 159
+ + G+ +I + ++IG LQ++GL LF SFLP ++ ++LSP+ +IL+LPG K
Sbjct 64 KGTLFYFGGLFVIIVKSTIIGFILQMFGLFYLFNSFLPNIVSYIKLSPLS-FILELPGIK 122
Query 160 QCTKWVLDGDKQLPL 174
Q ++W+ D ++LPL
Sbjct 123 QLSEWIYD-QRRLPL 136
Lambda K H
0.324 0.141 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 34096907735
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40